STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTN85_1858Radical SAM superfamily enzyme; arCOG00940. (397 aa)    
Predicted Functional Partners:
BTN85_1854
DNA-binding transcriptional regulator Lrp family; arCOG01628.
 
 0.984
BTN85_1853
DNA-binding transcriptional regulator Lrp family; arCOG01628.
 
 0.965
BTN85_1857
Uroporphyrinogen-III synthase HemD; arCOG02048; gene: hemD.
     
 0.827
BTN85_0650
Radical SAM superfamily enzyme; arCOG00940.
 
  
0.825
BTN85_1855
Siroheme synthase CysG; arCOG01044; gene: cysG.
       0.779
hemA
Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
     
 0.779
BTN85_0929
Nitrogenase molybdenum-iron protein alpha/beta chain NifD; arCOG00598; gene: nifD.
  
 
 0.574
BTN85_1852
ABC-type multidrug transport system, ATPase component CcmA; arCOG00196; gene: ccmA.
  
    0.495
BTN85_1158
Molybdopterin converting factor large subunit MoaE; arCOG00533; gene: moaE.
  
 
 0.493
BTN85_1157
Molybdopterin converting factor small subunit MoaD; arCOG00536; gene: moaD.
    
 0.485
Your Current Organism:
Methanohalarchaeum thermophilum
NCBI taxonomy Id: 1903181
Other names: C. Methanohalarchaeum thermophilum, Candidatus Methanohalarchaeum thermophilum, Euryarchaeota archaeon HMET1, archaeon HMET1, strain HMET1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.