STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTN85_2214arCOG03323; gene: mtbA. (363 aa)    
Predicted Functional Partners:
BTN85_2213
Trimethylamine corrinoid protein MtbC1; arCOG02028; gene: mtbC1.
 
 
  0.827
BTN85_1426
arCOG03323; gene: mtbA.
  
  
  0.767
BTN85_2215
MFS family permease; arCOG00147.
       0.718
BTN85_0093
arCOG03323; gene: mtbA.
  
     0.690
BTN85_0891
Putative Fe-S clusters-containing protein containing DUF4445 domain; arCOG02036.
  
   
 0.602
BTN85_1632
Porphobilinogen deaminase HemC; arCOG04299; gene: hemC.
  
 0.576
BTN85_0900
Putative Fe-S clusters-containing protein containing DUF4445 domain; arCOG02035.
  
  
 0.546
BTN85_0869
arCOG03325; gene: mtbA.
  
  
 
0.524
BTN85_1028
Trimethylamine corrinoid protein MtbC1; arCOG02028; gene: mtbC1.
 
 
  0.467
BTN85_1857
Uroporphyrinogen-III synthase HemD; arCOG02048; gene: hemD.
  
 
 0.453
Your Current Organism:
Methanohalarchaeum thermophilum
NCBI taxonomy Id: 1903181
Other names: C. Methanohalarchaeum thermophilum, Candidatus Methanohalarchaeum thermophilum, Euryarchaeota archaeon HMET1, archaeon HMET1, strain HMET1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.