STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900108345_00393Unannotated protein. (141 aa)    
Predicted Functional Partners:
GCA_900108345_00394
Unannotated protein.
 
   0.922
GCA_900108345_02937
Unannotated protein.
  
 
  0.847
GCA_900108345_03236
Unannotated protein.
 
 
  0.815
GCA_900108345_03235
Unannotated protein.
 
   0.769
GCA_900108345_03237
Unannotated protein.
 
    0.767
GCA_900108345_03555
Unannotated protein.
  
 
  0.675
GCA_900108345_00392
Unannotated protein.
       0.668
GCA_900108345_00438
Unannotated protein.
    
  0.629
GCA_900108345_01741
Unannotated protein.
    
  0.621
GCA_900108345_00390
Unannotated protein.
       0.604
Your Current Organism:
Bacteroides ndongoniae
NCBI taxonomy Id: 1903262
Other names: B. ndongoniae, Bacteroides sp. Marseille-P3108, CSUR P3108, DSM 103636, strain Marseille-P3108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.