STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900108345_01814Unannotated protein. (429 aa)    
Predicted Functional Partners:
GCA_900108345_01816
Unannotated protein.
 
   
 0.950
GCA_900108345_01813
Unannotated protein.
 
   
 0.921
GCA_900108345_01812
Unannotated protein.
 
  
 0.902
GCA_900108345_01818
Unannotated protein.
 
   
 0.896
GCA_900108345_01811
Unannotated protein.
 
   
 0.895
GCA_900108345_01817
Unannotated protein.
     0.889
GCA_900108345_01821
Unannotated protein.
 
   
 0.884
GCA_900108345_01820
Unannotated protein.
 
   
 0.871
GCA_900108345_01822
Unannotated protein.
 
   
 0.869
GCA_900108345_01825
Unannotated protein.
 
   
 0.854
Your Current Organism:
Bacteroides ndongoniae
NCBI taxonomy Id: 1903262
Other names: B. ndongoniae, Bacteroides sp. Marseille-P3108, CSUR P3108, DSM 103636, strain Marseille-P3108
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.