STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104665_00475Unannotated protein. (176 aa)    
Predicted Functional Partners:
GCA_900104665_00476
Unannotated protein.
       0.762
GCA_900104665_01601
Unannotated protein.
    
  0.662
GCA_900104665_00474
Unannotated protein.
       0.612
GCA_900104665_00472
Unannotated protein.
       0.610
GCA_900104665_00473
Unannotated protein.
       0.610
GCA_900104665_00481
Unannotated protein.
  
  
 0.596
GCA_900104665_00477
Unannotated protein.
       0.592
GCA_900104665_00479
Unannotated protein.
       0.591
GCA_900104665_00478
Unannotated protein.
       0.590
GCA_900104665_00105
Unannotated protein.
   
  
 0.468
Your Current Organism:
Traorella massiliensis
NCBI taxonomy Id: 1903263
Other names: CSUR P3110, DSM 103514, Dielma sp. Marseille-P3110, T. massiliensis, strain Marseille-P3110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.