STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104665_00814Unannotated protein. (149 aa)    
Predicted Functional Partners:
GCA_900104665_00807
Unannotated protein.
 
     0.788
GCA_900104665_00816
Unannotated protein.
 
     0.788
GCA_900104665_02414
Unannotated protein.
 
     0.775
GCA_900104665_00812
Unannotated protein.
     0.769
GCA_900104665_00820
Unannotated protein.
  
     0.757
GCA_900104665_02418
Unannotated protein.
     0.749
GCA_900104665_00801
Unannotated protein.
 
     0.744
GCA_900104665_00817
Unannotated protein.
 
     0.742
GCA_900104665_00802
Unannotated protein.
 
     0.741
GCA_900104665_00808
Unannotated protein.
 
     0.730
Your Current Organism:
Traorella massiliensis
NCBI taxonomy Id: 1903263
Other names: CSUR P3110, DSM 103514, Dielma sp. Marseille-P3110, T. massiliensis, strain Marseille-P3110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.