STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104665_00979Unannotated protein. (214 aa)    
Predicted Functional Partners:
GCA_900104665_01099
Unannotated protein.
    
 0.949
GCA_900104665_00978
Unannotated protein.
 
 
 0.887
GCA_900104665_01093
Unannotated protein.
  
 
 0.883
GCA_900104665_01524
Unannotated protein.
  
 
 0.883
GCA_900104665_00614
Unannotated protein.
    
  0.879
GCA_900104665_01704
Unannotated protein.
 
 
 0.878
GCA_900104665_01987
Unannotated protein.
    
  0.796
GCA_900104665_00972
Unannotated protein.
  
 
 0.744
GCA_900104665_00858
Unannotated protein.
  
 
 0.740
GCA_900104665_02204
Unannotated protein.
  
 
 0.739
Your Current Organism:
Traorella massiliensis
NCBI taxonomy Id: 1903263
Other names: CSUR P3110, DSM 103514, Dielma sp. Marseille-P3110, T. massiliensis, strain Marseille-P3110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.