STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104665_02547Unannotated protein. (333 aa)    
Predicted Functional Partners:
GCA_900104665_02548
Unannotated protein.
 
 0.999
GCA_900104665_00283
Unannotated protein.
 
 
 0.857
GCA_900104665_00726
Unannotated protein.
    
 0.831
GCA_900104665_00049
Unannotated protein.
  
 
 0.808
GCA_900104665_02550
Unannotated protein.
     
 0.799
GCA_900104665_02551
Unannotated protein.
     
 0.782
GCA_900104665_01397
Unannotated protein.
 
   
 0.774
GCA_900104665_01744
Unannotated protein.
 
   
 0.764
GCA_900104665_02549
Unannotated protein.
       0.748
GCA_900104665_02552
Unannotated protein.
  
  
 0.681
Your Current Organism:
Traorella massiliensis
NCBI taxonomy Id: 1903263
Other names: CSUR P3110, DSM 103514, Dielma sp. Marseille-P3110, T. massiliensis, strain Marseille-P3110
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.