STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEY99141.1GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa)    
Predicted Functional Partners:
OEZ01311.1
Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.780
OEZ00167.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.780
OEZ01414.1
Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.756
OEZ00246.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.756
OEY99673.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.756
OEZ00210.1
Betaine-aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.
 
 
 0.725
OEZ00611.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.671
OEZ01891.1
CesD/SycD/LcrH family type III secretion system chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.670
OEZ01375.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.670
OEZ00731.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.670
Your Current Organism:
Stenotrophomonas sp. BIIR7
NCBI taxonomy Id: 1904462
Other names: S. sp. BIIR7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.