STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APV49900.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (660 aa)    
Predicted Functional Partners:
APV50000.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.970
APV48351.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.968
APV51938.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.962
APV48826.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.961
APV51531.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.958
APV51554.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.957
APV49452.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.955
APV49905.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.952
APV48348.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.949
APV50291.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.948
Your Current Organism:
Betaproteobacteria bacterium GR1643
NCBI taxonomy Id: 1904640
Other names: B. bacterium GR16-43, Betaproteobacteria bacterium GR16-43, Nnibrrimonas geomnyongensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.