STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APV51725.1Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)    
Predicted Functional Partners:
APV51724.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.922
APV48637.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.892
APV52450.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.889
APV48354.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.862
APV49885.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.852
APV49834.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.851
APV50500.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.849
APV50538.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.849
APV49864.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.848
APV48985.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.843
Your Current Organism:
Betaproteobacteria bacterium GR1643
NCBI taxonomy Id: 1904640
Other names: B. bacterium GR16-43, Betaproteobacteria bacterium GR16-43, Nnibrrimonas geomnyongensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.