STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001982635_04055Unannotated protein. (123 aa)    
Predicted Functional Partners:
GCA_001982635_01011
Unannotated protein.
  
 
 0.637
GCA_001982635_02323
Unannotated protein.
  
 
 0.637
GCA_001982635_01081
Unannotated protein.
  
 
 0.636
GCA_001982635_01565
Unannotated protein.
  
 
 0.636
GCA_001982635_03472
Unannotated protein.
    
 0.568
GCA_001982635_04504
Unannotated protein.
   
    0.544
GCA_001982635_00427
Unannotated protein.
  
  
 0.523
GCA_001982635_04737
Unannotated protein.
    
  0.517
GCA_001982635_04739
Unannotated protein.
    
  0.517
GCA_001982635_06549
Unannotated protein.
 
 
  0.492
Your Current Organism:
Bradyrhizobium mercantei
NCBI taxonomy Id: 1904807
Other names: B. mercantei, BR 6010, Bradyrhizobium mercantei Helene et al. 2017, Bradyrhizobium sp. SEMIA 6399, Bradyrhizobium sp. SEMIA 6404, LMG 30031, LMG:30031, U675, strain SEMIA 6399
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.