Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XCC0130RhsD protein precursor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (391 aa)    
Predicted Functional Partners:
rhsD-2
RhsD protein precursor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.761
XCC0955
peptidyl-Asp metalloendopeptidase; Metalloprotease, specifically cleaves on the N-terminal side of aspartyl, glutamyl and cysteic acid residues. Belongs to the peptidase M72 family.
 
  
 0.595
XCC2749
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
    0.549
gumD
GumD protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
    0.539
XCC3461
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.526
XCC2722
Phospholipase A1; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.522
XCC2025
Serine protease; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
    0.516
XCC4206
Hypothetical protein; Putative; ORF located using Glimmer/Genemark.
  
     0.515
XCC0114
Transcriptional regulator; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.488
xrvA
Virulence regulator; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.471
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.