Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
lgtBGlycosyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (269 aa)    
Predicted Functional Partners:
XCC2437
Conserved hypothetical protein; Putative; ORF located using Glimmer/Genemark.
 
    0.744
avrBs2
Avirulence protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.736
XCC1682
Conserved hypothetical protein; Putative; ORF located using Glimmer/Genemark.
  
     0.727
XCC1625
Unknown acidic aa rich protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.699
uidR
Transcriptional regulator uid family; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.668
wxcB
Kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.660
XCC0677
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.658
XCC3477
Conserved hypothetical protein; Putative; ORF located using Glimmer/Genemark.
  
     0.637
fecA-2
TonB-dependent receptor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.628
XCC1668
Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.615
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
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