XCC0243 protein (Xanthomonas campestris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

XCC0243

Dipeptidyl anminopeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (697 aa)

Predicted Functional Partners:

pqqG

0.581

accC

0.524

pqqC

0.491

pqqE

0.420

Your Current Organism:

Xanthomonas campestris

NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
XCC0243	accC	XCC0243	XCC0244	Dipeptidyl anminopeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	Biotin carboxylase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	0.524
XCC0243	pqqC	XCC0243	XCC2938	Dipeptidyl anminopeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	PqqC protein; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.	0.491
XCC0243	pqqE	XCC0243	XCC2940	Dipeptidyl anminopeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	PqqE protein; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).	0.420
XCC0243	pqqG	XCC0243	XCC2937	Dipeptidyl anminopeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	Pyrroloquinoline quinone biosynthesis protein G; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.	0.581
accC	XCC0243	XCC0244	XCC0243	Biotin carboxylase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	Dipeptidyl anminopeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	0.524
pqqC	XCC0243	XCC2938	XCC0243	PqqC protein; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.	Dipeptidyl anminopeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	0.491
pqqC	pqqE	XCC2938	XCC2940	PqqC protein; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.	PqqE protein; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).	0.996
pqqC	pqqG	XCC2938	XCC2937	PqqC protein; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.	Pyrroloquinoline quinone biosynthesis protein G; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.	0.999
pqqE	XCC0243	XCC2940	XCC0243	PqqE protein; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).	Dipeptidyl anminopeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	0.420
pqqE	pqqC	XCC2940	XCC2938	PqqE protein; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).	PqqC protein; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.	0.996
pqqE	pqqG	XCC2940	XCC2937	PqqE protein; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).	Pyrroloquinoline quinone biosynthesis protein G; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.	0.997
pqqG	XCC0243	XCC2937	XCC0243	Pyrroloquinoline quinone biosynthesis protein G; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.	Dipeptidyl anminopeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	0.581
pqqG	pqqC	XCC2937	XCC2938	Pyrroloquinoline quinone biosynthesis protein G; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.	PqqC protein; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.	0.999
pqqG	pqqE	XCC2937	XCC2940	Pyrroloquinoline quinone biosynthesis protein G; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.	PqqE protein; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).	0.997

Server load: low (18%) [HD]

Permalink

Network

Neighborhood

Textmining

Fusion

Experiments

Co-occurrence

Databases

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About