Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ggtGamma-glutamyltranspeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (526 aa)    
Predicted Functional Partners:
gatA
Glu-tRNAGln amidotransferase A subunit; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.844
dctA
C4-dicarboxylate transport protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
   
 
 0.645
XCC0293
Nucleoside hydrolase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the IUNH family.
 
     0.571
cstA
Carbon starvation protein A; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
  
 0.547
fucP-2
Fucose permease; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.543
gltB
Glutamate synthase, alpha subunit; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.540
XCC4076
Two-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.533
amaB
N-carbamyl-L-amino acid amidohydrolase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
   
 0.507
XCC0283
Serine-pyruvate aminotransferase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.450
add
Adenosine deaminase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
   
 0.441
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
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