Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
drb00803-alpha-hydroxysteroid dehydrogenase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (255 aa)    
Predicted Functional Partners:
xylC
Benzaldehyde dehydrogenase II; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the aldehyde dehydrogenase family.
 
   0.818
ucpA
Alcohol dehydrogenase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.746
XCC0352
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.706
XCC0423
Oxidoreductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.700
entF
ATP-dependent serine activating enzyme; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
 0.657
XCC3636
Oxidoreductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.649
XCC3721
Short chain oxidoreductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.622
phbB-2
acetoacetyl-coA reductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.599
phbB
acetoacetyl-CoA reductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.588
XCC0416
3-oxoacyl-[ACP] reductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.573
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.