STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsbDC-type cytochrome biogenesis protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; copper tolerance. (768 aa)    
Predicted Functional Partners:
dsbC
Disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
  
 
 0.981
cutA
Periplasmic divalent cation tolerance protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.959
dsbE-2
C-type cytochrome biogenesis protein/thioredoxin dsbE or; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.921
dsbB
Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.
   
  
 0.906
dsbA
Disulfide oxidoreductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
 0.895
dsbA-2
Thiol:disulfide interchange protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
 0.895
yneN
Thioredoxin; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
 0.887
cycM
Cytochrome C552; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.758
cox3
Cytochrome C oxidase subunit III; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.752
bccP
Biotin carboxyl carrier protein of acetyl-CoA; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
     
 0.718
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.