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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phuROuter membrane hemin receptor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (743 aa)    
Predicted Functional Partners:
XCC0767
Conserved hypothetical protein; Putative; ORF located using Glimmer/Genemark.
  
  
 0.818
XCC0769
Conserved hypothetical protein; Putative; ORF located using Glimmer/Genemark.
       0.812
XCC0770
Conserved hypothetical protein; Putative; ORF located using Glimmer/Genemark.
 
     0.747
tonB
TonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (By similarity).
 
 
 0.579
XCC1593
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.579
XCC0481
Bacterioferritin-associated ferredoxin; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.537
XCC1354
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.537
fecR
Transmembrane sensor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.533
fpvA
Ferripyoverdine receptor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.514
XCC3216
Outer membrane receptor for ferric iron uptake; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.504
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.