Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XCC0795Acetoin utilization family protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (302 aa)    
Predicted Functional Partners:
XCC3278
Flavin monoamine oxidase-related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
 0.874
XCC2764
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 0.830
cobB-2
SIR2-like regulatory protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
    
 0.819
XCC0989
Protein phosphatase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
 
 0.777
glpF
Glycerol uptake facilitator protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.768
XCC0796
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the Cob(I)alamin adenosyltransferase family.
       0.763
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
   0.762
XCC1817
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
    
   0.761
XCC0812
Conserved hypothetical protein; Putative; ORF located using Glimmer/Genemark.
    
 0.756
XCC3798
Conserved hypothetical protein; Putative; ORF located using Glimmer/Genemark.
    
 0.756
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
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