Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ahpFAlkyl hydroperoxide reductase subunit F; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (529 aa)    
Predicted Functional Partners:
ahpC
Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
 
  
 0.998
oxyR
Oxidative stress transcriptional regulator; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the LysR transcriptional regulatory family.
     
 0.918
oxyR-2
Hydrogen peroxide-inducible genes activator protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the LysR transcriptional regulatory family.
     
 0.840
ohr
Organic hydroperoxide resistance protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.803
katG
Catalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
  
  
 0.755
bcp
Bacterioferritin comigratory protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides and as sensor of hydrogen peroxide-mediated signaling events.
      
 0.755
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.754
catB
Catalase precursor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the catalase family.
  
  
 0.705
XCC2946
DNA-binding related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the Dps family.
 
  
 0.639
srpA
Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
  
  
 0.621
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
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