STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1006Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (649 aa)    
Predicted Functional Partners:
XCC1007
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 0.985
moxR-2
Methanol dehydrogenase regulator; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
   
 0.955
slp
Outer membrane protein Slp; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.800
pilO
Fimbrial assembly membrane protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.722
pilN
Fimbrial assembly membrane protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.701
pilP
Fimbrial assembly protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.675
fimT-2
Pre-pilin like leader sequence; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.674
fimT
Fimbrial biogenesis protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.667
pilM
Fimbrial assembly membrane protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.666
pilV
Pre-pilin leader sequence; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.665
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.