Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
XCC1082Oxidoreductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (327 aa)    
Predicted Functional Partners:
XCC3636
Oxidoreductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
   0.643
ucpA
Alcohol dehydrogenase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
   0.581
fabG-2
3-oxoacyl-[ACP] reductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
   0.579
trn2
Tropinone reductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
   0.572
XCC4067
Oxidoreductase; Plays a role in the catabolism of L-fucose. Catalyzes the NAD(+)-dependent oxidation of 2-keo-3-deoxy-L-fuconate to 2,4-diketo-3- deoxy-L-fuconate; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.561
XCC1057
Oxidoreductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
   0.551
ptr1
Pteridine reductase 1; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
   0.533
XCC1083
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.510
XCC1441
Short chain dehydrogenase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.486
XCC1081
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.482
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
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