close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrpB7HrpB7 protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (169 aa)    
Predicted Functional Partners:
hrpB4
HrpB4 protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.925
hrcN
HrpB6 protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.920
hrpB5
HrpB5 protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.889
hrcT
HrpB8 protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.880
hrcJ
HrcJ protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.872
hrpB2
HrpB2 protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.847
hrpB1
HrpB1 protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.820
hrcQ
HrcQ protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.796
hrcV
HrcV; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.716
hpaP
HpaP protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.701
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.