Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
XCC1376Pili assembly chaperone; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (238 aa)    
Predicted Functional Partners:
fasD
Outer membrane usher protein FasD; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 0.998
XCC1378
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 0.994
pru
Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 0.994
ecpD
Pili assembly chaperone; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 
0.964
XCC1377
Hypothetical protein; Putative; ORF located using Glimmer/Genemark.
       0.779
fhaC
Outer membrane hemolysin activator protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.699
XCC2025
Serine protease; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
    0.531
XCC1333
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.514
XCC1298
Serine protease; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
    0.511
atpB
ATP synthase A chain; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
      
 0.506
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
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