STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ggt-2Gamma-glutamyltranspeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (593 aa)    
Predicted Functional Partners:
ggt
Gamma-glutamyltranspeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 
0.926
ggt-3
Gamma-glutamyltranspeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 
0.922
XCC2579
Reductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.911
gshB
Glutathione synthetase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
    
 0.911
pepA
Aminopeptidase A/I; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
 0.906
XCC3904
Leucine aminopeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the peptidase M17 family.
     
 0.906
gpo
Glutathione peroxidase-like protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glutathione peroxidase family.
     
 0.905
btuE
ABC transporter vitamin B12 uptake permease; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glutathione peroxidase family.
     
 0.905
btuE-2
Glutathione peroxidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glutathione peroxidase family.
     
 0.905
tauD
Taurine dioxygenase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
  0.900
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.