STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
orf37Phage-related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (887 aa)    
Predicted Functional Partners:
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.823
orf35
Phage-related integrase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the 'phage' integrase family.
     
 0.798
N
Phage-related major capsid protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
   
 0.784
Q
Phage-related capsid packaging protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
    0.775
P
Phage-related terminase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.773
O
Phage-related capsid scaffold protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.773
M
Phage-related terminase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.773
L
Phage-related capsid completion protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.771
R
Phage-related tail protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.769
E
Phage-related tail protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.768
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.