Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D | X | XCC2994 | XCC2975 | Phage-related tail protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | Phage-related tail protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.972 |
D | XCC3133 | XCC2994 | XCC3133 | Phage-related tail protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | DNA helicase related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.401 |
X | D | XCC2975 | XCC2994 | Phage-related tail protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | Phage-related tail protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.972 |
X | XCC3133 | XCC2975 | XCC3133 | Phage-related tail protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | DNA helicase related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.442 |
XCC2104 | XCC3133 | XCC2104 | XCC3133 | Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | DNA helicase related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.646 |
XCC3133 | D | XCC3133 | XCC2994 | DNA helicase related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | Phage-related tail protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.401 |
XCC3133 | X | XCC3133 | XCC2975 | DNA helicase related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | Phage-related tail protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.442 |
XCC3133 | XCC2104 | XCC3133 | XCC2104 | DNA helicase related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.646 |
XCC3133 | ybdL | XCC3133 | XCC2218 | DNA helicase related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | Succinyldiaminopimelate transaminase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.485 |
ybdL | XCC3133 | XCC2218 | XCC3133 | Succinyldiaminopimelate transaminase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | DNA helicase related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.485 |