STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbeFpre-B cell enhancing factor related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the NAPRTase family. (468 aa)    
Predicted Functional Partners:
XCC3446
Bifunctional NMN adenylyltransferase/nudix hydrolase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.991
XCC1718
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the CinA family.
  
 
 0.936
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
    
 0.936
XCC1547
5'-nucleotidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
  0.911
MazG
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.909
nudC
NADH pyrophosphatase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
    
 0.907
surE
Survival protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.901
XCC3443
Conserved hypothetical protein; Putative; ORF located using Glimmer/Genemark; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.812
XCC3444
Conserved hypothetical protein; Putative; ORF located using Glimmer/Genemark.
       0.777
XCC3442
Conserved hypothetical protein; Putative; ORF located using Glimmer/Genemark.
       0.773
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.