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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3476Surface antigen protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (348 aa)    
Predicted Functional Partners:
XCC3477
Conserved hypothetical protein; Putative; ORF located using Glimmer/Genemark.
 
 
 0.969
mxaF
Methanol dehydrogenase heavy chain; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.946
moxJ
MoxJ protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.921
fepA-2
TonB-dependent receptor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.906
mxaF-2
Methanol dehydrogenase heavy chain; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.897
pqqE
PqqE protein; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).
 
  
 0.880
entF
ATP-dependent serine activating enzyme; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.830
XCC3277
Cytochrome C6; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
 0.821
XCC3480
ISxac3 transposase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.773
pqqC/D
PqqC/D protein; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.
 
  
 0.754
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.