Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mxaFMethanol dehydrogenase heavy chain; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (109 aa)    
Predicted Functional Partners:
mxaF-2
Methanol dehydrogenase heavy chain; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
  0.988
XCC3476
Surface antigen protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
    0.946
moxJ
MoxJ protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.940
XCC3477
Conserved hypothetical protein; Putative; ORF located using Glimmer/Genemark.
 
 
 0.889
fepA-2
TonB-dependent receptor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
    0.865
pqqG
Pyrroloquinoline quinone biosynthesis protein G; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.
 
  
 0.824
pqqC
PqqC protein; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.
 
  
 0.804
iucA
Iron transporter; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.799
pqqE
PqqE protein; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).
 
  
 0.789
XCC3480
ISxac3 transposase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.773
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
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