Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
motA-2Chemotaxis protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (284 aa)    
Predicted Functional Partners:
motB-2
Chemotaxis MotB protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 0.999
motB
MotB protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 0.986
flgJ
Flagellar protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.942
fliF
Flagellar protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.931
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.927
cheR-4
Methyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.927
flgC
Flagellar biosynthesis, cell-proximal portion of basal-body rod; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the flagella basal body rod proteins family.
 
  
 0.926
flgK
Flagellar protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the flagella basal body rod proteins family.
 
  
 0.918
fliG
Flagellar protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.909
flgG
Flagellar biosynthesis, cell-distal portion of basal-body rod; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the flagella basal body rod proteins family.
 
  
 0.909
Your Current Organism:
Xanthomonas campestris
NCBI taxonomy Id: 190485
Other names: X. campestris pv. campestris str. ATCC 33913, Xanthomonas campestris pv. campestris str. ATCC 33913
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