STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000725545_00117Unannotated protein. (373 aa)    
Predicted Functional Partners:
GCA_000725545_00115
Unannotated protein.
 
 0.999
GCA_000725545_00116
Unannotated protein.
 
 0.999
GCA_000725545_01417
Unannotated protein.
  
 0.994
GCA_000725545_01073
Unannotated protein.
  
 0.992
GCA_000725545_01908
Unannotated protein.
  
 0.992
GCA_000725545_01075
Unannotated protein.
  
 0.971
GCA_000725545_01905
Unannotated protein.
  
 0.971
GCA_000725545_00119
Unannotated protein.
 
     0.950
GCA_000725545_01906
Unannotated protein.
  
 
 0.944
GCA_000725545_00118
Unannotated protein.
 
     0.935
Your Current Organism:
Streptomyces exfoliatus
NCBI taxonomy Id: 1905
Other names: ATCC 12627, ATCC 19750, Actinomyces exfoliatus, BCRC 11469, CBS 489.68, CCRC 11469, CCRC:11469, CCUG 11113, DSM 40060, IFO 13191, ISP 5060, JCM 4366, LMG 19307, LMG:19307, NBRC 13191, NCIMB 12599, NRRL B-2924, NRRL-ISP 5060, PCM 2367, S. exfoliatus, Streptomyces sp. (strain UC5319), Streptomyces sp. UC5319, Streptomyces sp. USC006, Streptomyces sp. USC040, Streptomyces sp. USC041, Streptomyces sp. USC049, Streptomyces sp. USC052, Streptomyces sp. USC053, Streptomyces sp. USC058, Streptomyces sp. USC062, Streptomyces sp. USC065, Streptomyces sp. USC066, Streptomyces sp. USC068, Streptomyces sp. USC070, UNIQEM 137, VKM Ac-767
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.