STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000725545_00455Unannotated protein. (903 aa)    
Predicted Functional Partners:
GCA_000725545_01697
Unannotated protein.
 
 0.999
GCA_000725545_04645
Unannotated protein.
 
 0.999
GCA_000725545_02013
Unannotated protein.
 
 0.998
GCA_000725545_04466
Unannotated protein.
  
 0.997
GCA_000725545_02066
Unannotated protein.
   
 0.993
GCA_000725545_00874
Unannotated protein.
   
 0.991
GCA_000725545_01647
Unannotated protein.
   
 0.991
GCA_000725545_03126
Unannotated protein.
   
 0.991
GCA_000725545_02081
Unannotated protein.
  
 0.978
GCA_000725545_05564
Unannotated protein.
  
 0.978
Your Current Organism:
Streptomyces exfoliatus
NCBI taxonomy Id: 1905
Other names: ATCC 12627, ATCC 19750, Actinomyces exfoliatus, BCRC 11469, CBS 489.68, CCRC 11469, CCRC:11469, CCUG 11113, DSM 40060, IFO 13191, ISP 5060, JCM 4366, LMG 19307, LMG:19307, NBRC 13191, NCIMB 12599, NRRL B-2924, NRRL-ISP 5060, PCM 2367, S. exfoliatus, Streptomyces sp. (strain UC5319), Streptomyces sp. UC5319, Streptomyces sp. USC006, Streptomyces sp. USC040, Streptomyces sp. USC041, Streptomyces sp. USC049, Streptomyces sp. USC052, Streptomyces sp. USC053, Streptomyces sp. USC058, Streptomyces sp. USC062, Streptomyces sp. USC065, Streptomyces sp. USC066, Streptomyces sp. USC068, Streptomyces sp. USC070, UNIQEM 137, VKM Ac-767
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.