STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000725545_02044Unannotated protein. (434 aa)    
Predicted Functional Partners:
GCA_000725545_02041
Unannotated protein.
 
 
 0.994
GCA_000725545_02042
Unannotated protein.
 
 0.993
GCA_000725545_01232
Unannotated protein.
 
 
 0.974
GCA_000725545_01235
Unannotated protein.
 
 0.967
GCA_000725545_04411
Unannotated protein.
 
 0.952
GCA_000725545_04413
Unannotated protein.
   
 0.941
GCA_000725545_01234
Unannotated protein.
 
  
 0.933
GCA_000725545_04011
Unannotated protein.
 
  
 0.924
GCA_000725545_01233
Unannotated protein.
 
 
 0.919
GCA_000725545_06437
Unannotated protein.
   
 0.915
Your Current Organism:
Streptomyces exfoliatus
NCBI taxonomy Id: 1905
Other names: ATCC 12627, ATCC 19750, Actinomyces exfoliatus, BCRC 11469, CBS 489.68, CCRC 11469, CCRC:11469, CCUG 11113, DSM 40060, IFO 13191, ISP 5060, JCM 4366, LMG 19307, LMG:19307, NBRC 13191, NCIMB 12599, NRRL B-2924, NRRL-ISP 5060, PCM 2367, S. exfoliatus, Streptomyces sp. (strain UC5319), Streptomyces sp. UC5319, Streptomyces sp. USC006, Streptomyces sp. USC040, Streptomyces sp. USC041, Streptomyces sp. USC049, Streptomyces sp. USC052, Streptomyces sp. USC053, Streptomyces sp. USC058, Streptomyces sp. USC062, Streptomyces sp. USC065, Streptomyces sp. USC066, Streptomyces sp. USC068, Streptomyces sp. USC070, UNIQEM 137, VKM Ac-767
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.