STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000725545_03513Unannotated protein. (250 aa)    
Predicted Functional Partners:
GCA_000725545_05572
Unannotated protein.
   
   0.942
GCA_000725545_03517
Unannotated protein.
  
  
 0.656
GCA_000725545_03510
Unannotated protein.
       0.567
GCA_000725545_03511
Unannotated protein.
       0.567
GCA_000725545_03512
Unannotated protein.
       0.567
GCA_000725545_03509
Unannotated protein.
  
    0.520
GCA_000725545_05903
Unannotated protein.
 
   
 0.474
Your Current Organism:
Streptomyces exfoliatus
NCBI taxonomy Id: 1905
Other names: ATCC 12627, ATCC 19750, Actinomyces exfoliatus, BCRC 11469, CBS 489.68, CCRC 11469, CCRC:11469, CCUG 11113, DSM 40060, IFO 13191, ISP 5060, JCM 4366, LMG 19307, LMG:19307, NBRC 13191, NCIMB 12599, NRRL B-2924, NRRL-ISP 5060, PCM 2367, S. exfoliatus, Streptomyces sp. (strain UC5319), Streptomyces sp. UC5319, Streptomyces sp. USC006, Streptomyces sp. USC040, Streptomyces sp. USC041, Streptomyces sp. USC049, Streptomyces sp. USC052, Streptomyces sp. USC053, Streptomyces sp. USC058, Streptomyces sp. USC062, Streptomyces sp. USC065, Streptomyces sp. USC066, Streptomyces sp. USC068, Streptomyces sp. USC070, UNIQEM 137, VKM Ac-767
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.