STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJJ10342.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)    
Predicted Functional Partners:
OJJ10344.1
C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.848
OJJ10345.1
TRAP transporter small permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.840
OJJ09379.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
  0.772
OJJ10347.1
Hydroxyquinol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.716
OJJ10639.1
Malonic semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.685
OJJ10343.1
Osmotically inducible protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.684
OJJ10640.1
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.622
OJJ10348.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.584
OJJ10346.1
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.576
OJJ10341.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.526
Your Current Organism:
Alphaproteobacteria bacterium AO1B
NCBI taxonomy Id: 1905358
Other names: A. bacterium AO1-B, Alphaproteobacteria bacterium AO1-B
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