STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompXOuter membrane protein OmpX. (171 aa)    
Predicted Functional Partners:
aaeX
Protein AaeX.
  
     0.774
W5S_0637
Uncharacterized protein.
  
     0.774
mzrA
Modulator protein MzrA; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
  
     0.773
W5S_1456
Uncharacterized protein.
  
     0.773
W5S_2067
DNA polymerase III, theta subunit.
  
     0.773
W5S_2069
DUF2511 domain-containing protein.
  
     0.773
W5S_2286
DNA replication terminus site-binding protein.
  
     0.773
W5S_2243
UPF0259 membrane protein W5S_2243.
  
     0.772
W5S_2382
Protein YdgH.
  
     0.770
W5S_1162
Enhanced serine sensitivity protein SseB.
  
     0.769
Your Current Organism:
Pectobacterium parmentieri
NCBI taxonomy Id: 1905730
Other names: CFBP 8475, LMG 29774, LMG:29774, P. parmentieri, Pectobacterium parmentieri Khayi et al. 2016, Pectobacterium sp. SCC3193, strain RNS 08-42-1A, strain RNS 08.42.1A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.