STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001899335_00133Unannotated protein. (535 aa)    
Predicted Functional Partners:
GCA_001899335_01630
Unannotated protein.
   
 0.882
GCA_001899335_00297
Unannotated protein.
   
  0.867
GCA_001899335_00783
Unannotated protein.
   
  0.867
GCA_001899335_00809
Unannotated protein.
   
  0.867
GCA_001899335_00134
Unannotated protein.
 
    
0.780
GCA_001899335_01802
Unannotated protein.
    
 0.739
GCA_001899335_00132
Unannotated protein.
       0.723
GCA_001899335_00227
Unannotated protein.
    
 0.683
GCA_001899335_00998
Unannotated protein.
  
 0.663
GCA_001899335_01438
Unannotated protein.
   
 0.654
Your Current Organism:
Gastranaerophilus phascolarctosicola
NCBI taxonomy Id: 1906137
Other names: C. Gastranaerophilus phascolarctosicola, Candidatus Gastranaerophilus phascolarctosicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.