STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001899335_00236Unannotated protein. (399 aa)    
Predicted Functional Partners:
GCA_001899335_00313
Unannotated protein.
  
 
 0.894
GCA_001899335_00235
Unannotated protein.
       0.773
GCA_001899335_00237
Unannotated protein.
       0.773
GCA_001899335_00238
Unannotated protein.
       0.746
GCA_001899335_01585
Unannotated protein.
    
  0.668
GCA_001899335_00312
Unannotated protein.
  
 
 0.577
GCA_001899335_00686
Unannotated protein.
  
 
 0.577
GCA_001899335_00234
Unannotated protein.
       0.545
GCA_001899335_00239
Unannotated protein.
       0.517
GCA_001899335_00233
Unannotated protein.
 
    0.498
Your Current Organism:
Gastranaerophilus phascolarctosicola
NCBI taxonomy Id: 1906137
Other names: C. Gastranaerophilus phascolarctosicola, Candidatus Gastranaerophilus phascolarctosicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.