STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001899335_00312Unannotated protein. (131 aa)    
Predicted Functional Partners:
GCA_001899335_00313
Unannotated protein.
 
 
 0.980
GCA_001899335_00958
Unannotated protein.
   
 0.952
GCA_001899335_00425
Unannotated protein.
  
 0.842
GCA_001899335_00311
Unannotated protein.
    
  0.840
GCA_001899335_00971
Unannotated protein.
   
   0.795
GCA_001899335_00106
Unannotated protein.
   
 0.784
GCA_001899335_00549
Unannotated protein.
    
   0.768
GCA_001899335_00659
Unannotated protein.
    
 0.747
GCA_001899335_01272
Unannotated protein.
    
 0.747
GCA_001899335_01615
Unannotated protein.
    
 0.747
Your Current Organism:
Gastranaerophilus phascolarctosicola
NCBI taxonomy Id: 1906137
Other names: C. Gastranaerophilus phascolarctosicola, Candidatus Gastranaerophilus phascolarctosicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.