STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001899335_00502Unannotated protein. (174 aa)    
Predicted Functional Partners:
GCA_001899335_00500
Unannotated protein.
  
    0.785
GCA_001899335_00501
Unannotated protein.
       0.778
GCA_001899335_00965
Unannotated protein.
 
  
 0.760
GCA_001899335_00926
Unannotated protein.
   
    0.637
GCA_001899335_00499
Unannotated protein.
       0.610
GCA_001899335_01646
Unannotated protein.
  
    0.600
GCA_001899335_00503
Unannotated protein.
       0.558
GCA_001899335_00504
Unannotated protein.
       0.558
GCA_001899335_01457
Unannotated protein.
 
   
 0.426
GCA_001899335_00498
Unannotated protein.
       0.401
Your Current Organism:
Gastranaerophilus phascolarctosicola
NCBI taxonomy Id: 1906137
Other names: C. Gastranaerophilus phascolarctosicola, Candidatus Gastranaerophilus phascolarctosicola
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.