STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001899335_01036Unannotated protein. (307 aa)    
Predicted Functional Partners:
GCA_001899335_00748
Unannotated protein.
 
 0.999
GCA_001899335_00747
Unannotated protein.
 0.998
GCA_001899335_01035
Unannotated protein.
       0.773
GCA_001899335_00270
Unannotated protein.
      0.722
GCA_001899335_01206
Unannotated protein.
  
  
 0.690
GCA_001899335_01638
Unannotated protein.
  
    0.673
GCA_001899335_01034
Unannotated protein.
       0.651
GCA_001899335_00586
Unannotated protein.
  
    0.606
GCA_001899335_01412
Unannotated protein.
 
 
    0.558
GCA_001899335_01037
Unannotated protein.
       0.510
Your Current Organism:
Gastranaerophilus phascolarctosicola
NCBI taxonomy Id: 1906137
Other names: C. Gastranaerophilus phascolarctosicola, Candidatus Gastranaerophilus phascolarctosicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.