STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001899335_01066Unannotated protein. (363 aa)    
Predicted Functional Partners:
GCA_001899335_01738
Unannotated protein.
 
 
 0.897
GCA_001899335_01045
Unannotated protein.
 
  
 0.766
GCA_001899335_00651
Unannotated protein.
    
 0.759
GCA_001899335_00517
Unannotated protein.
 
  
 0.714
GCA_001899335_01805
Unannotated protein.
  
  
 0.657
GCA_001899335_01065
Unannotated protein.
       0.627
GCA_001899335_01063
Unannotated protein.
       0.615
GCA_001899335_01064
Unannotated protein.
       0.615
GCA_001899335_00271
Unannotated protein.
 
  
 0.565
GCA_001899335_01067
Unannotated protein.
       0.547
Your Current Organism:
Gastranaerophilus phascolarctosicola
NCBI taxonomy Id: 1906137
Other names: C. Gastranaerophilus phascolarctosicola, Candidatus Gastranaerophilus phascolarctosicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.