STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001899335_01375Unannotated protein. (34 aa)    
Predicted Functional Partners:
GCA_001899335_01374
Unannotated protein.
       0.689
GCA_001899335_01372
Unannotated protein.
       0.675
GCA_001899335_01373
Unannotated protein.
       0.675
GCA_001899335_01370
Unannotated protein.
       0.636
GCA_001899335_01371
Unannotated protein.
       0.636
GCA_001899335_01376
Unannotated protein.
       0.543
GCA_001899335_01377
Unannotated protein.
       0.543
GCA_001899335_01369
Unannotated protein.
       0.508
GCA_001899335_01368
Unannotated protein.
       0.457
Your Current Organism:
Gastranaerophilus phascolarctosicola
NCBI taxonomy Id: 1906137
Other names: C. Gastranaerophilus phascolarctosicola, Candidatus Gastranaerophilus phascolarctosicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.