STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001899315_01936Unannotated protein. (478 aa)    
Predicted Functional Partners:
GCA_001899315_01935
Unannotated protein.
  
  
 0.847
GCA_001899315_02635
Unannotated protein.
   
    0.752
GCA_001899315_00820
Unannotated protein.
   
  
 0.658
GCA_001899315_03319
Unannotated protein.
   
  
 0.658
GCA_001899315_01938
Unannotated protein.
 
     0.606
GCA_001899315_01937
Unannotated protein.
       0.547
GCA_001899315_02315
Unannotated protein.
 
   
 0.526
GCA_001899315_03549
Unannotated protein.
 
   
 0.524
GCA_001899315_00003
Unannotated protein.
   
  
 0.515
GCA_001899315_01414
Unannotated protein.
   
  
 0.515
Your Current Organism:
Obscuribacter phosphatis
NCBI taxonomy Id: 1906157
Other names: C. Obscuribacter phosphatis, Candidatus Obscuribacter phosphatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.