STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapCvapC protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (128 aa)    
Predicted Functional Partners:
CC_0032
vapB family protein; Similar to GB:L42023 PID:1003535 PID:1222247 PID:1204574 SP:Q57534; identified by sequence similarity; putative.
  
 
 0.999
parD2
Hypothetical protein; Antitoxin component of a non-functional type II toxin- antitoxin (TA system). Does not neutralize the effect of any of the RelE or ParE toxins.
   
   0.686
relB2
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. Neutralizes the effect of cognate toxin RelE2, but no other RelE or ParE toxin.
   
   0.686
CC_2565
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.577
CC_0033
Hypothetical protein; Identified by Glimmer2; putative.
       0.517
CC_2983
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.450
CC_2420
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.439
CC_2572
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.415
CC_0087
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.405
CC_2891
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.401
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.