STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_0051Transcriptional regulator, Cro/CI family; Identified by match to protein family HMM. (142 aa)    
Predicted Functional Partners:
recO
Conserved hypothetical protein; Involved in DNA repair and RecF pathway recombination.
  
    0.711
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
  
  
 0.695
CC_3292
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.692
CC_0053
CBS domain protein; Identified by match to protein family HMM.
  
    0.684
ybeY
Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.678
HolA
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.678
CC_2932
Sensor histidine kinase; Identified by match to protein family HMM.
  
    0.643
CC_0055
Phosphate starvation-inducible protein PhoH, putative; Similar to GB:D10391 SP:P31544 PID:285774 GB:U00096 PID:1651507; identified by sequence similarity; putative.
       0.635
CC_0075
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.635
CC_1365
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.627
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.