Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0062 | CC_0063 | CC_0062 | CC_0063 | NifU-like domain protein; Identified by match to protein family HMM. | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | 0.572 |
| CC_0062 | CC_2394 | CC_0062 | CC_2394 | NifU-like domain protein; Identified by match to protein family HMM. | Vanillate O-demethylase, reductase subunit; Identified by match to protein family HMM. | 0.514 |
| CC_0062 | fdxB | CC_0062 | CC_3524 | NifU-like domain protein; Identified by match to protein family HMM. | Ferredoxin, 2Fe-2S; Identified by match to protein family HMM. | 0.400 |
| CC_0063 | CC_0062 | CC_0063 | CC_0062 | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | NifU-like domain protein; Identified by match to protein family HMM. | 0.572 |
| CC_0063 | CC_1163 | CC_0063 | CC_1163 | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | Acyl carrier protein, putative; Identified by match to PFAM protein family HMM PF00550. | 0.547 |
| CC_0063 | CC_1232 | CC_0063 | CC_1232 | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.566 |
| CC_0063 | CC_1344 | CC_0063 | CC_1344 | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | FF domain protein; Identified by match to protein family HMM. | 0.556 |
| CC_0063 | CC_2394 | CC_0063 | CC_2394 | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | Vanillate O-demethylase, reductase subunit; Identified by match to protein family HMM. | 0.976 |
| CC_0063 | CC_3525 | CC_0063 | CC_3525 | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | Ferredoxin reductase; Identified by match to protein family HMM. | 0.681 |
| CC_0063 | acpP | CC_0063 | CC_1677 | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.547 |
| CC_0063 | fdxB | CC_0063 | CC_3524 | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | Ferredoxin, 2Fe-2S; Identified by match to protein family HMM. | 0.890 |
| CC_0063 | polA | CC_0063 | CC_3464 | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.895 |
| CC_0063 | rplF | CC_0063 | CC_1263 | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.736 |
| CC_1163 | CC_0063 | CC_1163 | CC_0063 | Acyl carrier protein, putative; Identified by match to PFAM protein family HMM PF00550. | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | 0.547 |
| CC_1163 | CC_2394 | CC_1163 | CC_2394 | Acyl carrier protein, putative; Identified by match to PFAM protein family HMM PF00550. | Vanillate O-demethylase, reductase subunit; Identified by match to protein family HMM. | 0.477 |
| CC_1163 | fdxB | CC_1163 | CC_3524 | Acyl carrier protein, putative; Identified by match to PFAM protein family HMM PF00550. | Ferredoxin, 2Fe-2S; Identified by match to protein family HMM. | 0.427 |
| CC_1163 | polA | CC_1163 | CC_3464 | Acyl carrier protein, putative; Identified by match to PFAM protein family HMM PF00550. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.659 |
| CC_1232 | CC_0063 | CC_1232 | CC_0063 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | 0.566 |
| CC_1232 | CC_1344 | CC_1232 | CC_1344 | Conserved hypothetical protein; Identified by Glimmer2; putative. | FF domain protein; Identified by match to protein family HMM. | 0.638 |
| CC_1344 | CC_0063 | CC_1344 | CC_0063 | FF domain protein; Identified by match to protein family HMM. | Identified by match to protein family HMM; Belongs to the cytochrome P450 family. | 0.556 |
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