Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0085 | CC_1141 | CC_0085 | CC_1141 | Phosphoglucomutase; Identified by match to protein family HMM. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.913 |
| CC_0085 | CC_2264 | CC_0085 | CC_2264 | Phosphoglucomutase; Identified by match to protein family HMM. | Identified by match to protein family HMM. | 0.937 |
| CC_0085 | CC_3167 | CC_0085 | CC_3167 | Phosphoglucomutase; Identified by match to protein family HMM. | Identified by match to protein family HMM; Belongs to the bacterial glucokinase family. | 0.915 |
| CC_0085 | CC_3620 | CC_0085 | CC_3620 | Phosphoglucomutase; Identified by match to protein family HMM. | Identified by match to TIGR protein family HMM TIGR00232; Belongs to the transketolase family. | 0.939 |
| CC_0085 | CC_3637 | CC_0085 | CC_3637 | Phosphoglucomutase; Identified by match to protein family HMM. | UTP--glucose-1-phosphate uridylyltransferase; Identified by match to protein family HMM. | 0.934 |
| CC_0085 | glk | CC_0085 | CC_2054 | Phosphoglucomutase; Identified by match to protein family HMM. | Glucokinase; Identified by match to TIGR protein family HMM TIGR00749; Belongs to the bacterial glucokinase family. | 0.915 |
| CC_0085 | pgi | CC_0085 | CC_0222 | Phosphoglucomutase; Identified by match to protein family HMM. | Glucose-6-phosphate isomerase; Identified by match to protein family HMM. | 0.991 |
| CC_0085 | rbsK | CC_0085 | CC_0950 | Phosphoglucomutase; Identified by match to protein family HMM. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.912 |
| CC_0085 | rpiA | CC_0085 | CC_2303 | Phosphoglucomutase; Identified by match to protein family HMM. | Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.928 |
| CC_0085 | tal | CC_0085 | CC_3614 | Phosphoglucomutase; Identified by match to protein family HMM. | Transaldolase family protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.912 |
| CC_1141 | CC_0085 | CC_1141 | CC_0085 | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | Phosphoglucomutase; Identified by match to protein family HMM. | 0.913 |
| CC_1141 | CC_2264 | CC_1141 | CC_2264 | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | Identified by match to protein family HMM. | 0.934 |
| CC_1141 | CC_3637 | CC_1141 | CC_3637 | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | UTP--glucose-1-phosphate uridylyltransferase; Identified by match to protein family HMM. | 0.950 |
| CC_2264 | CC_0085 | CC_2264 | CC_0085 | Identified by match to protein family HMM. | Phosphoglucomutase; Identified by match to protein family HMM. | 0.937 |
| CC_2264 | CC_1141 | CC_2264 | CC_1141 | Identified by match to protein family HMM. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.934 |
| CC_2264 | CC_3167 | CC_2264 | CC_3167 | Identified by match to protein family HMM. | Identified by match to protein family HMM; Belongs to the bacterial glucokinase family. | 0.915 |
| CC_2264 | CC_3620 | CC_2264 | CC_3620 | Identified by match to protein family HMM. | Identified by match to TIGR protein family HMM TIGR00232; Belongs to the transketolase family. | 0.925 |
| CC_2264 | CC_3637 | CC_2264 | CC_3637 | Identified by match to protein family HMM. | UTP--glucose-1-phosphate uridylyltransferase; Identified by match to protein family HMM. | 0.969 |
| CC_2264 | glk | CC_2264 | CC_2054 | Identified by match to protein family HMM. | Glucokinase; Identified by match to TIGR protein family HMM TIGR00749; Belongs to the bacterial glucokinase family. | 0.915 |
| CC_2264 | pgi | CC_2264 | CC_0222 | Identified by match to protein family HMM. | Glucose-6-phosphate isomerase; Identified by match to protein family HMM. | 0.925 |
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